Timeline



03/08/11:

11:04 Ticket #200 (IDAnalyticBH: Kerr initial data not smooth near z-axis) closed by Erik Schnetter
fixed: Applied. This thorn has no working test cases.
11:02 Ticket #306 (SimFactory should not delete all .log files when syncing) closed by Erik Schnetter
fixed: Corrected.
10:41 Ticket #172 (CCL error message has no file name) closed by Erik Schnetter
fixed: Applied.
10:21 Ticket #129 (Warnings during syncing) closed by Erik Schnetter
fixed: These warnings are gone since certain files (probably .log and .pyc) …
10:20 Ticket #127 (Restarts should have hard link to executable) reopened by Erik Schnetter
No, this is not the case. Simulations contain the executable, but …
10:18 Ticket #125 (Old SimFactory web page should have a link to the new one) closed by Erik Schnetter
fixed: Done.
10:13 Ticket #77 (Strange error message) closed by Erik Schnetter
fixed: We assume this problem has been corrected.
10:02 Ticket #205 (Running on Requin fails) closed by Erik Schnetter
fixed: This works now.
09:28 Ticket #100 (ExternalLibraries/HDF5/HDF5.sh fails to catch a missing library file ...) closed by Ian Hinder
invalid: I have created #332 requesting that Cactus not override configuration …
09:27 Ticket #332 (Cactus should not interpret environment variables as configuration options) created by Ian Hinder
Currently, if you have the variable HDF5_DIR set in your shell startup …
08:22 Ticket #127 (Restarts should have hard link to executable) closed by Ian Hinder
fixed: As far as I know, this has been the case for a long time, so I am …
08:06 Ticket #300 (Support for Fedora builds) closed by Ian Hinder
fixed
07:37 Ticket #331 (SimFactory does not abort if it has been given a nonexistent optionlist) created by Ian Hinder
If I specify a nonexistent optionlist in a machine's .ini file, I get …
07:23 Ticket #155 (SimFactory tutorial does not say how to download GetComponents) closed by Ian Hinder
fixed: I have added the appropriate text.
06:38 Ticket #330 (Allow the user to choose whether to receive job notification emails) created by Ian Hinder
Most HPC batch systems can be configured to send users an email when …

03/06/11:

11:32 Ticket #329 (SimFactory/ranger-intel11.cfg: Are BLAS and LAPACK compilations on ...) created by bmundim
ranger-intel11.cfg now sets BLAS and LAPACK to be built along with the …

03/04/11:

21:14 Ticket #328 (TRAC frequently logs users out) created by Ian Hinder
There seems to be some mechanism which is automatically logging users …
14:35 Ticket #327 (Simfactory: ranger-intel11.run question.) created by bmundim
Shouldn't we load intel/11.1 there, since the default on Ranger is …
12:28 Ticket #326 (Update gsl path in Ranger option file to gsl 1.13) created by bmundim
Ranger config file has been updated recently, so I thought to bring to …
10:58 Ticket #263 (run-script cannot find output-0000-active) closed by Frank Löffler
fixed: I seems to work with an updated version now. Thanks.
07:10 Ticket #325 (sim setup issues) created by anonymous
I have started with a fresh checkout of SimFactory and am using 'sim …

03/02/11:

20:18 Ticket #319 (more OpenMP WORKSHARE sections in GRHydro Reconstruct) closed by Roland Haas
fixed
18:31 Ticket #324 (Unknown MDB keys should lead to syntax error) created by Erik Schnetter
If SimFactory encounters and MDB key that it does not know, then this …
16:14 Ticket #323 (GetComponents overwrites thorn list) created by Erik Schnetter
I specified a thorn list located in the main Cactus directory. …
13:35 Ticket #322 (SimFactory metadata deleted by periodic filesystem purges) created by Ian Hinder
Production filesystems are subject to periodic purges (typically on …
10:07 Ticket #321 (show-output is broken) created by Erik Schnetter
The command show-output is broken on my laptop. Here is the relevant …
08:50 Ticket #320 (missing OMP PRIVATE in CarpetLib (W)ENO prolongation) created by Roland Haas
this one is actually harmless since the section in question is …
08:28 Ticket #319 (more OpenMP WORKSHARE sections in GRHydro Reconstruct) created by Roland Haas
the attached patch compiles and should at least do no harm. It adds …
08:19 Ticket #318 (add "Report bug" link to Einstein Toolkit sidebar item) created by Roland Haas
Is there a link somehwere on the ET website to link to the Issue …

02/28/11:

14:13 Ticket #310 (segfault with kerr initial data using IDAnalyticBH) closed by bmundim
fixed
14:12 Ticket #309 (segfault with kerr initial data using IDAnalyticBH) closed by bmundim
fixed
04:46 Ticket #317 (Unproper bevaviour of sim submit when changing the parfile) created by alexander.beck-ratzka@…
If I make changes to the parfile of my simulation, and call then …

02/27/11:

10:43 Ticket #316 (Checkpoint recovery nonfunctional) created by Ian Hinder
Checkpoint recovery is nonfunctional in SimFactory 2 (it has broken …
05:43 Ticket #315 (Cannot cleanup simulations) created by Ian Hinder
Using r1234, I cannot clean up a simulation on damiana. I get the …
01:07 Ticket #314 (File simulation-1298790275.96 should be in SIMFACTORY directory) created by Erik Schnetter
A simulation of mine contains a file simulation-1298790275.96. This …

02/26/11:

18:30 Ticket #313 (Reorder CUDA specific makefile rules) created by Erik Schnetter
The rules to build CUDA source files are very similar to those for C …
14:53 Ticket #312 (typo in eosgeneral con2prim causes assignment to full array instead of ...) closed by Frank Löffler
fixed: Patch looks good - thanks Roland!
12:14 Ticket #312 (typo in eosgeneral con2prim causes assignment to full array instead of ...) created by Roland Haas
in Con2PrimGeneral inside a "do k .. do j .. do i" loop an assignment …
08:01 Ticket #303 (expand $1 and $2 in GIT_REPO,DARCS_REPO,HG_REPO) closed by Eric Seidel
fixed: Thanks for the patch Roland. It all seems to work for me, so consider …

02/25/11:

22:28 Ticket #287 (NVCC option should be renamed CUCC) closed by Frank Löffler
fixed
11:06 Ticket #308 (SimFactory does not use the submit script defined in a machine) closed by mthomas
fixed: this problem has been corrected as of revision r1233.
11:05 Ticket #307 (SimFactory 2 does not use my default thornlist) closed by mthomas
fixed: This problem has been fixed as of revision r1233
03:51 Ticket #311 (TimerReport: Allow user to disable scheduled function timer table) created by Ian Hinder
Now that TimerReport has several options for outputting timer data, …

02/24/11:

10:19 Ticket #310 (segfault with kerr initial data using IDAnalyticBH) created by bmundim
Yosef's bug report and patch: Hi, If initial_data=kerr and …
10:13 Ticket #309 (segfault with kerr initial data using IDAnalyticBH) created by bmundim
Yosef's bug report and patch: Hi, If initial_data=kerr and …
05:49 Ticket #308 (SimFactory does not use the submit script defined in a machine) created by Ian Hinder
When building a configuration, simfactory is supposed to add the …
04:55 Ticket #307 (SimFactory 2 does not use my default thornlist) created by Ian Hinder
When I create a new configuration using: sim2 build sim2_datura I …
04:45 Ticket #306 (SimFactory should not delete all .log files when syncing) created by Ian Hinder
In defs.ini, all *.log files are excluded from a sync. These are part …
04:41 Ticket #305 (Machine entry in defs.local.ini but not in mdb leads to bad error message) created by Ian Hinder
If I have an entry for my local machine in defs.local.ini but I do not …

02/23/11:

12:14 Ticket #288 ("build" overwrites thorn list) closed by mthomas
fixed: Simfactory has been modified to not overwrite the thornlist, …
10:14 Ticket #304 (SimFactory should not clean-up so aggressively) created by Ian Hinder
As far as I can tell, SimFactory 2 currently cleans up all simulations …
09:55 Ticket #293 ("interactive" does not expand SHORT_SIMULATION_NAME) closed by mthomas
fixed: fixed.
09:53 Ticket #297 ("interactive" ends with error message) closed by mthomas
fixed: fixed.
09:42 Ticket #295 (Simfactory (python version) not able to submit jobs on bluedrop.) closed by mthomas
fixed: Between job submission by simfactory and the first query of job status …
09:26 Ticket #303 (expand $1 and $2 in GIT_REPO,DARCS_REPO,HG_REPO) created by Roland Haas
I propose to apply the patch below to allow $1 and $2 to be expanded …
09:13 Ticket #299 (simfactory does not detect changes to stored option list) closed by Steven R. Brandt
invalid
09:11 Ticket #267 (simfactory does not detect changes to stored option list) closed by Steven R. Brandt
invalid
09:10 Ticket #301 (LORENE build has a race condition) closed by Steven R. Brandt
invalid
08:12 Ticket #302 (Multipole HDF5 file truncation with multiple variables) created by Ian Hinder
Previously a "first_time" variable was used to determine if truncation …
07:24 Ticket #301 (LORENE build has a race condition) created by Steven R. Brandt
About half the time I try to build cactus on Fedora the build fails in …

02/22/11:

21:15 Ticket #300 (Support for Fedora builds) created by Steven R. Brandt
The attached fedora.cfg file will help anyone who wants to build on …

02/21/11:

12:53 Ticket #298 (Update JPeg thorn) closed by Frank Löffler
fixed: I updated libjpeg in ExternalLibraries from 8b to 8c. I agree that …
11:24 Ticket #299 (simfactory does not detect changes to stored option list) created by Steven R. Brandt
When I update my local .cfg file, SimFactory does not see it and the …

02/20/11:

12:54 Ticket #296 (Update HDF5 to 1.8.6) closed by Erik Schnetter
fixed: Done.
12:41 Ticket #298 (Update JPeg thorn) created by Erik Schnetter
Cactus provides the jpeg library version 6b via thorn …

02/19/11:

20:03 Ticket #236 (GetComponents should abort on undefined variables) closed by Eric Seidel
fixed: Sorry this one took a while... GetComponents will now send escaped …

02/18/11:

17:44 Ticket #297 ("interactive" ends with error message) created by Erik Schnetter
When I close the shell of an interactive command, Simfactory aborts …
11:28 Ticket #212 (Rate-limit cleanups) closed by mthomas
fixed: Cleanups are now rate limited. (every 30 seconds)
09:42 Ticket #296 (Update HDF5 to 1.8.6) created by Erik Schnetter

02/17/11:

16:45 Ticket #295 (Simfactory (python version) not able to submit jobs on bluedrop.) created by diener@…
With the most recent version of the python version of simfactory, job …
16:32 Ticket #294 (Idea for interactive commands running a command) created by Erik Schnetter
On some systems, one can use ssh to access compute nodes if one has a …
15:27 Ticket #293 ("interactive" does not expand SHORT_SIMULATION_NAME) created by Erik Schnetter
15:14 Ticket #292 (Support interactive commands on Lincoln) closed by Erik Schnetter
fixed: Done.
14:56 Ticket #292 (Support interactive commands on Lincoln) created by Erik Schnetter
Interactive commands are not yet supported on Lincoln
05:50 Ticket #291 (new python simfactory does not overtake the "-roe" option of Cactus is ...) created by alexander.beck-ratzka@…
I my template for RunScript, I have the line: [snip] time …

02/15/11:

16:04 Ticket #290 ("iomachine" ignored for syncing) created by Erik Schnetter
I think the "iomachine" MDB entry is not used when syncing to a machine.
06:33 Ticket #287 (NVCC option should be renamed CUCC) reopened by Frank Löffler
Thanks for the patch. Please don't close the ticket until the patch is …
03:33 Ticket #289 (latex reports errors when compile UserGuide manual) created by Jian Tao
gmake reported an error and many warning messages when I tried to …
03:19 Ticket #287 (NVCC option should be renamed CUCC) closed by Jian Tao
fixed

02/14/11:

17:40 Ticket #288 ("build" overwrites thorn list) created by Erik Schnetter
The command "sim build empty" overrides the existing thornlist of …
14:45 Ticket #287 (NVCC option should be renamed CUCC) created by Erik Schnetter
The configuration option to specify the CUDA C compiler should be …
09:12 Ticket #286 (Writing/reading grid structure should be explicit operations) created by Erik Schnetter
Carpet should offer explicit routines to write and read all grid …
04:01 Ticket #285 (python simfactory submit does not remove active link after job ...) created by alexander.beck-ratzka@…
The python version of simfactory does not remove the active link …

02/12/11:

09:54 Ticket #257 (Add support for Hopper II) closed by Erik Schnetter
fixed: Done.

02/11/11:

11:56 Ticket #284 (Set cache characteristics) closed by mthomas
fixed: added CACHELINE_BYTES mapped to L3linesize, and CACHE_SIZE mapped to L3size
11:26 Ticket #211 (Unexpected output before "sync") closed by mthomas
fixed: Cleanup system is much quieter now... this problem appears to now be gone.
07:22 Ticket #212 (Rate-limit cleanups) reopened by Erik Schnetter
There could instead be a single file that is acts on all simulations, …

02/10/11:

16:31 Ticket #212 (Rate-limit cleanups) closed by mthomas
fixed: Cleanups should now be rate limited. It will only attempt to cleanup a …
15:36 Ticket #277 (list-simulations is incomplete) closed by mthomas
fixed: I think I've cleaned this up -- reopen if it still isn't what you're …
15:02 Ticket #284 (Set cache characteristics) created by Erik Schnetter
When building, set the Cactus configuration variables CACHELINE_BYTES …
15:01 Ticket #269 (new python simfactory revision does not create a new simulation ...) closed by mthomas
fixed: this has been fixed as of revision r1206
14:51 Ticket #266 (simfactory should be callable for 'login' operations from anywhere) closed by mthomas
fixed: This is done.
14:51 Ticket #274 (TypeError: sequence item 1: expected string, NoneType found) closed by mthomas
fixed: sim login will now work if it doesn't know where Cactus is. I also got …
14:20 Ticket #275 (Empty line in output of list-simulations) closed by mthomas
fixed: empty line is gone.
13:46 Ticket #278 (Rename "alwaysprint" to "output") closed by mthomas
fixed: ok. done.
13:43 Ticket #280 (There should be both "debug" and "verbos") closed by mthomas
fixed: --verbose is going to be used to get verbose output. To get more …
13:34 Ticket #282 (type type type) closed by mthomas
fixed: this error message has been corrected.
10:24 Ticket #265 (simfactory sync fails with special ssh keys) closed by mthomas
worksforme: When i tried to duplicate this problem uisng the current version of …
10:00 Ticket #276 (cleanup is not inhibited after errors) closed by mthomas
fixed: This has been implemented. I've added a new job_status - E. How this …
00:00 Ticket #283 (Update CoreDoc and make it part of the ET) created by bmundim
The advanced concepts document: …

02/09/11:

16:50 Ticket #282 (type type type) created by Erik Schnetter
I just received the following error message: $ ./bin/sim sync hopper2 …
16:05 WikiStart edited by Frank Löffler
(diff)
15:57 Ticket #281 (compile error is not linked) created by Frank Löffler
Info: Simfactory command: /home/knarf/utils/simfactory/lib/sim.py …
14:53 Ticket #280 (There should be both "debug" and "verbos") created by Erik Schnetter
The "--verbose" option currently has two effects: one, it makes the …
13:37 Ticket #149 (BVec in HydroBase/interface.ccl should be an axial vector) closed by Roland Haas
fixed
13:36 Ticket #254 (tensorparity=-1 quantities in ReflectionSymmetry) closed by Roland Haas
fixed
12:24 WikiStart edited by Frank Löffler
(diff)
12:23 WikiStart edited by Frank Löffler
(diff)
11:53 Ticket #279 (Compiling with Mac OS and Intel compiler leads to missing library warning) created by Ian Hinder
When I compile Cactus with the Intel compiler on Mac OS I get the …
10:45 Ticket #278 (Rename "alwaysprint" to "output") created by Erik Schnetter
The name "alwaysprint" seems strange. Something like "output" would be …
10:44 Ticket #277 (list-simulations is incomplete) created by Erik Schnetter
list-simulations does not distinguish between active and inactive …
10:27 Ticket #276 (cleanup is not inhibited after errors) created by Erik Schnetter
SimFactory should detect if qsub or qstat failed, or if the …
10:00 Ticket #275 (Empty line in output of list-simulations) created by Erik Schnetter
The output below has an empty line between the two simulations. This …
09:29 Ticket #272 (GetComponents: use of uninitialized values.) closed by Eric Seidel
fixed: Thanks for catching this. GetComponents was populating the list of …
09:27 Ticket #261 (GetComponents misleading warning message) closed by Eric Seidel
fixed: Good point, I use git status --porcelain --untracked-files=no now.
09:26 Ticket #248 (Enhance GetComponents functionality when dealing with git branches) closed by Eric Seidel
fixed: > {{{ > # this will setup stable and experimental as remote-tracking …
09:05 Ticket #274 (TypeError: sequence item 1: expected string, NoneType found) created by Frank Löffler
Hi, I executed simfactory to login to hopper, and got: […] The …
08:34 Ticket #273 (GetComponents: -p option triggers scalar leaks) created by bmundim
Hi, when using the parallel option, -p, GetComponents, or, better, …
08:05 Ticket #272 (GetComponents: use of uninitialized values.) created by bmundim
Hi, I am receiving the following kind of messages when updating my …

02/08/11:

09:08 Ticket #271 (python simfactory submit creates only the SubmitScript) created by alexander.beck-ratzka@…
The python version of simfactory submit creates only the submitScript …
07:41 Ticket #270 (Need web instructions for building on a new machine) created by Erik Schnetter
We should have instructions on the web that explain how to build the …
07:14 Ticket #269 (new python simfactory revision does not create a new simulation ...) created by alexander.beck-ratzka@…
With a revision of mid of December it was possible to create a new …

02/07/11:

15:53 Ticket #268 (The CUDA flags need to be documented) created by Frank Löffler
The new CUDA flags in the flesh (r4684) need to be documented.
13:50 Ticket #267 (simfactory does not detect changes to stored option list) created by Steven R. Brandt
When you update the .ini and .cfg files you have to delete the config …
11:33 Ticket #261 (GetComponents misleading warning message) reopened by Eric Seidel
Ah of course it wouldn't be available on earlier versions of git. Can …
09:38 Ticket #266 (simfactory should be callable for 'login' operations from anywhere) created by Frank Löffler
I tried 'sim login philip' from outside my sourcebasedir. I expected …
09:37 Ticket #264 (Reference Manual gives wrong include file for CCTK_TerminateNext) closed by Erik Schnetter
fixed: It seems all is fine now.
09:04 Ticket #264 (Reference Manual gives wrong include file for CCTK_TerminateNext) reopened by Erik Schnetter
We should also add a Fortran wrapper.
08:34 Ticket #264 (Reference Manual gives wrong include file for CCTK_TerminateNext) closed by Frank Löffler
fixed: cctk_Termination.h is now included from cctk.h
08:14 Ticket #265 (simfactory sync fails with special ssh keys) created by anonymous
If I invoke rsync manually, e.g. by: [snip] rsync -e "ssh -i …
07:02 Ticket #264 (Reference Manual gives wrong include file for CCTK_TerminateNext) created by roland.haas@…
CCTK_TerminateNext is declared in cctk_Termination.h not in cctk.h …

02/06/11:

23:51 Ticket #263 (run-script cannot find output-0000-active) created by Frank Löffler
While trying to run on philip: …
11:50 Ticket #261 (GetComponents misleading warning message) closed by Eric Seidel
fixed: Ok, I've implemented what I described above. Please let me know if you …
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